STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP44990.1Protein of unknown function. (332 aa)    
Predicted Functional Partners:
SFQ50982.1
Predicted chitinase.
  
     0.748
SFQ49950.1
Predicted chitinase.
  
     0.738
SFQ50566.1
Predicted chitinase.
  
     0.725
SFQ13676.1
Predicted chitinase.
  
     0.720
SFQ43843.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
  
     0.716
SFQ46316.1
Hypothetical protein.
  
     0.684
SFP42688.1
Hypothetical protein.
  
     0.651
SFP95123.1
DNA primase.
  
     0.639
SFP90921.1
DNA binding domain-containing protein, excisionase family.
 
     0.623
SFQ45330.1
Putative chitinase.
  
     0.615
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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