STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP40958.1Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family. (321 aa)    
Predicted Functional Partners:
SFP40982.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
    0.775
SFP40930.1
Stress responsive A/B Barrel Domain.
       0.678
SFQ20882.1
Cytochrome b6-f complex iron-sulfur subunit.
  
     0.501
SFP99620.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
     0.486
SFP40908.1
Hypothetical protein.
       0.458
SFQ13370.1
Starch-binding associating with outer membrane.
  
     0.445
SFP56875.1
Rieske [2Fe-2S] domain-containing protein.
  
     0.428
SFQ48785.1
Predicted dehydrogenase.
  
    0.404
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.