STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP63571.1N-carbamoylputrescine amidase. (287 aa)    
Predicted Functional Partners:
SFP59474.1
Agmatine deiminase; Belongs to the agmatine deiminase family.
 
 0.992
SFQ40435.1
Glutamate synthase (NADH) large subunit.
    
 0.860
SFP23960.1
Bifunctional NMN adenylyltransferase/nudix hydrolase.
   
 0.859
SFP83043.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
 0.705
SFQ46866.1
Acetylornithine/succinyldiaminopimelate/putresci ne aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.699
SFP63724.1
Allosteric NADP-dependent malic enzyme.
    
  0.695
SFP64505.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
  0.661
SFQ34911.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 
 0.644
SFP63550.1
Heptosyltransferase-2.
       0.623
SFP82220.1
Agmatinase; Belongs to the arginase family.
  
 
 0.543
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.