STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP75012.1ABC-type antimicrobial peptide transport system, permease component. (878 aa)    
Predicted Functional Partners:
SFQ28741.1
Putative ABC transport system ATP-binding protein.
 
 0.998
SFQ28909.1
ABC-type lipoprotein export system, ATPase component.
 
 0.998
SFP87961.1
Putative ABC transport system ATP-binding protein.
 
 0.995
SFP42559.1
Putative ABC transport system ATP-binding protein.
 
 0.994
SFP44548.1
Putative ABC transport system ATP-binding protein.
  
 0.993
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.993
SFQ28723.1
HlyD family secretion protein.
 
 
 0.880
SFP75040.1
ABC-type antimicrobial peptide transport system, permease component.
 
 
0.823
SFP49471.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.778
SFP28495.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.694
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.