STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (558 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase.
 
 0.999
SFP86140.1
Histidine ammonia-lyase.
 
 0.999
SFP86061.1
Formiminoglutamase; Belongs to the arginase family.
  
  
 0.848
SFP08396.1
Imidazolonepropionase.
  
 
 0.724
SFP08423.1
Imidazolonepropionase.
  
 
 0.724
SFP30787.1
Imidazolonepropionase.
  
 
 0.724
SFP31462.1
Imidazolonepropionase.
  
 
 0.724
SFP47657.1
Imidazolonepropionase.
  
 
 0.724
SFQ06198.1
FAD dependent oxidoreductase.
     
 0.440
SFQ42419.1
Succinate dehydrogenase subunit A.
     
 0.440
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.