STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP86550.1Protein of unknown function. (574 aa)    
Predicted Functional Partners:
SFP97637.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
    0.965
SFP86524.1
D-amino-acid dehydrogenase.
 
     0.854
SFP02632.1
Zinc carboxypeptidase.
  
     0.559
SFP02613.1
Zinc carboxypeptidase.
  
     0.514
SFP86497.1
Hypothetical protein.
       0.496
SFQ28929.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.476
SFQ06555.1
Protoporphyrinogen oxidase.
  
     0.465
SFP26849.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
  
    0.407
SFQ39365.1
Chain length determinant protein.
  
     0.407
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.