STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP92139.1Cell division protein FtsI (penicillin-binding protein 3). (707 aa)    
Predicted Functional Partners:
SFP94573.1
Cell division protein FtsQ.
 
 
 0.990
SFP94475.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 0.971
SFQ13584.1
Rod shape determining protein RodA; Belongs to the SEDS family.
 
 0.962
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
  
 0.953
SFQ13565.1
Penicillin-binding protein 2.
  
  
 
0.908
SFQ32735.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.896
SFQ13415.1
Penicillin-binding protein 1A.
 
 
 0.877
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 0.864
SFP46073.1
Long-chain fatty acid transport protein.
  
 
 0.862
SFP74055.1
Hypothetical protein.
  
 
 0.862
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.