STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP98451.1Hypothetical protein. (789 aa)    
Predicted Functional Partners:
SFP28884.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.657
SFQ20307.1
Hypothetical protein.
  
     0.634
SFQ47294.1
Ketosteroid isomerase-related protein.
  
     0.601
SFP31918.1
Hypothetical protein.
  
     0.561
SFP45273.1
WD40-like Beta Propeller Repeat.
 
  
  0.553
SFQ42964.1
Hypothetical protein.
  
     0.545
SFP34760.1
Outer membrane protein OmpA.
 
  
  0.504
SFQ46100.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
    
  0.504
SFQ11574.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.501
SFQ33205.1
CcmD family protein.
  
     0.486
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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