STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ17156.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (405 aa)    
Predicted Functional Partners:
SFQ17136.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.845
SFQ29014.1
O-antigen ligase like membrane protein.
 
   
 0.798
SFQ29053.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.794
SFQ29032.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
  0.789
SFQ28980.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.787
SFQ28960.1
Glycosyl transferases group 1.
 
  
  0.766
SFQ28995.1
Hypothetical protein.
 
  
  0.726
SFQ17121.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
    0.625
SFQ17209.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
   
 0.620
SFQ46100.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
   
 0.619
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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