STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ27162.1Predicted Peptidoglycan domain-containing protein. (206 aa)    
Predicted Functional Partners:
SFQ27121.1
Hypothetical protein.
       0.773
SFQ27142.1
Hypothetical protein.
       0.773
SFQ27106.1
Hypothetical protein.
       0.668
SFQ27183.1
Hypothetical protein.
       0.608
SFQ26978.1
Hypothetical protein.
       0.537
SFQ27070.1
Hypothetical protein.
       0.536
SFQ27089.1
Hypothetical protein.
       0.536
SFQ26999.1
Hypothetical protein.
       0.529
SFQ27016.1
Hypothetical protein.
       0.529
SFQ27032.1
Hypothetical protein.
       0.529
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.