STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ33244.1Heme exporter protein B. (274 aa)    
Predicted Functional Partners:
SFQ33225.1
Heme exporter protein C.
 
 0.999
SFQ33185.1
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.957
SFQ33160.1
Cytochrome c-type biogenesis protein CcmF.
 
  
 0.889
SFQ33205.1
CcmD family protein.
 
     0.852
SFP69853.1
ABC-type multidrug transport system, ATPase component.
 
  
  0.772
SFQ39640.1
Hypothetical protein.
  
     0.740
SFP27855.1
Hypothetical protein.
  
     0.714
SFP28191.1
Hypothetical protein.
  
     0.690
SFP25013.1
Hypothetical protein.
  
     0.678
SFP50382.1
Tfp pilus assembly protein PilF.
  
     0.675
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.