STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ39720.1Glycosyltransferase involved in cell wall bisynthesis. (376 aa)    
Predicted Functional Partners:
SFQ39707.1
Hypothetical protein.
 
    0.713
SFQ39734.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.670
SFP44947.1
Hypothetical protein.
    
 
 0.587
SFQ39696.1
Glycosyl transferase family 2.
 
    0.554
SFQ39750.1
Hypothetical protein.
 
     0.531
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.497
SFP73414.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.
   
  0.497
SFQ30001.1
Maltooligosyl trehalose hydrolase.
   
  0.497
SFQ43069.1
Glycogen recognition site of AMP-activated protein kinase.
   
  0.497
SFQ06658.1
Dolichol-phosphate mannosyltransferase.
  
 
 0.469
Your Current Organism:
Pseudarcicella hirudinis
NCBI taxonomy Id: 1079859
Other names: Arcicella sp. E92, CCM 7988, LMG 26720, LMG:26720, P. hirudinis, Pseudarcicella hirudinis Kampfer et al. 2012, strain E92
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