STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000226455_01859Unannotated protein. (272 aa)    
Predicted Functional Partners:
GCA_000226455_01860
Unannotated protein.
  
    0.726
GCA_000226455_01856
Unannotated protein.
 
    0.710
GCA_000226455_01861
Unannotated protein.
       0.642
GCA_000226455_01855
Unannotated protein.
       0.636
GCA_000226455_01858
Unannotated protein.
       0.596
GCA_000226455_02157
Unannotated protein.
   
 0.550
GCA_000226455_07830
Unannotated protein.
  
 
 0.549
GCA_000226455_07813
Unannotated protein.
  
 
 0.540
GCA_000226455_04380
Unannotated protein.
  
 
 0.506
GCA_000226455_06875
Unannotated protein.
  
     0.504
Your Current Organism:
Streptomyces chartreusis
NCBI taxonomy Id: 1079986
Other names: S. chartreusis NRRL 12338, Streptomyces chartreusis NRRL 12338, Streptomyces chartreusis str. NRRL 12338, Streptomyces chartreusis strain NRRL 12338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.