STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000226455_06317Unannotated protein. (83 aa)    
Predicted Functional Partners:
GCA_000226455_06318
Unannotated protein.
       0.791
GCA_000226455_06319
Unannotated protein.
       0.687
GCA_000226455_06320
Unannotated protein.
       0.644
GCA_000226455_06322
Unannotated protein.
       0.613
GCA_000226455_00442
Unannotated protein.
      
 0.450
GCA_000226455_00589
Unannotated protein.
      
 0.450
GCA_000226455_00721
Unannotated protein.
      
 0.450
GCA_000226455_02246
Unannotated protein.
      
 0.450
GCA_000226455_06642
Unannotated protein.
      
 0.450
GCA_000226455_06183
Unannotated protein.
      
 0.416
Your Current Organism:
Streptomyces chartreusis
NCBI taxonomy Id: 1079986
Other names: S. chartreusis NRRL 12338, Streptomyces chartreusis NRRL 12338, Streptomyces chartreusis str. NRRL 12338, Streptomyces chartreusis strain NRRL 12338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.