STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ12444.1Acyl-CoA hydrolase. (136 aa)    
Predicted Functional Partners:
SDQ12406.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
       0.773
SDQ12419.1
ABC transporter.
       0.773
SDQ12428.1
Cytosine/adenosine deaminase.
       0.773
SDQ31747.1
3-hydroxyacyl-CoA dehydrogenase.
   
 0.773
SDQ12382.1
Hypothetical protein.
       0.543
SDQ12393.1
MFS transporter, CP family, cyanate transporter.
       0.543
SDQ12371.1
Glycerol-3-phosphate cytidylyltransferase.
  
   0.465
SDQ09024.1
FAD/FMN-containing dehydrogenase.
   
   0.416
SDQ29816.1
Glycolate oxidase.
    
   0.412
Your Current Organism:
Leucobacter chromiiresistens
NCBI taxonomy Id: 1079994
Other names: CCOS 200, CCOS:200, DSM 22788, JCM 17813, L. chromiiresistens, Leucobacter chromiiresistens Sturm et al. 2011, strain JG 31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.