STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ23114.1DNA-binding transcriptional regulator, HxlR family. (114 aa)    
Predicted Functional Partners:
SDQ16024.1
DNA-binding transcriptional regulator, HxlR family.
  
     0.774
SDQ23102.1
FMN-dependent NADH-azoreductase.
 
   
 0.672
SDQ31663.1
PemK-like, MazF-like toxin of type II toxin-antitoxin system.
   
    0.588
Your Current Organism:
Leucobacter chromiiresistens
NCBI taxonomy Id: 1079994
Other names: CCOS 200, CCOS:200, DSM 22788, JCM 17813, L. chromiiresistens, Leucobacter chromiiresistens Sturm et al. 2011, strain JG 31
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.