Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B1C78_00410 | OOG28888.1 | B1C78_00410 | B1C78_00415 | Transcriptional regulator; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endonuclease/exonuclease/phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.718 |
| OOG23488.1 | OOG25576.1 | B1C78_11180 | B1C78_06595 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| OOG23488.1 | OOG25969.1 | B1C78_11180 | B1C78_05425 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.728 |
| OOG23488.1 | OOG28104.1 | B1C78_11180 | B1C78_01945 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.828 |
| OOG23488.1 | OOG28888.1 | B1C78_11180 | B1C78_00415 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Endonuclease/exonuclease/phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.820 |
| OOG23488.1 | polA | B1C78_11180 | B1C78_04440 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.996 |
| OOG25576.1 | OOG23488.1 | B1C78_06595 | B1C78_11180 | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.989 |
| OOG25576.1 | OOG28104.1 | B1C78_06595 | B1C78_01945 | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.855 |
| OOG25576.1 | OOG28888.1 | B1C78_06595 | B1C78_00415 | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endonuclease/exonuclease/phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
| OOG25576.1 | nth | B1C78_06595 | B1C78_09630 | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.442 |
| OOG25576.1 | polA | B1C78_06595 | B1C78_04440 | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.889 |
| OOG25940.1 | OOG28888.1 | B1C78_05685 | B1C78_00415 | 23S rRNA pseudouridylate synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family. | Endonuclease/exonuclease/phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.661 |
| OOG25969.1 | OOG23488.1 | B1C78_05425 | B1C78_11180 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.728 |
| OOG25969.1 | OOG28104.1 | B1C78_05425 | B1C78_01945 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
| OOG25969.1 | OOG28788.1 | B1C78_05425 | B1C78_00115 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | biotin--[acetyl-CoA-carboxylase] ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.595 |
| OOG25969.1 | OOG28888.1 | B1C78_05425 | B1C78_00415 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Endonuclease/exonuclease/phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.793 |
| OOG25969.1 | nth | B1C78_05425 | B1C78_09630 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.680 |
| OOG28104.1 | OOG23488.1 | B1C78_01945 | B1C78_11180 | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.828 |
| OOG28104.1 | OOG25576.1 | B1C78_01945 | B1C78_06595 | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.855 |
| OOG28104.1 | OOG25969.1 | B1C78_01945 | B1C78_05425 | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.428 |
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