STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOG27711.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)    
Predicted Functional Partners:
OOG27709.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.962
OOG27710.1
Respiratory nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.900
OOG25163.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.826
OOG27144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.783
OOG26477.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.783
OOG26828.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.782
OOG28071.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.773
OOG23128.1
Nitric-oxide reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.756
OOG23133.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.745
OOG23091.1
Cytochrome c oxidase subunit 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.745
Your Current Organism:
Thioalkalivibrio denitrificans
NCBI taxonomy Id: 108003
Other names: DSM 13742, NCCB 100001, Thialkalivibrio denitrificans, Thioalkalivibrio denitrificans Sorokin et al. 2001, strain ALJD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.