STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOG24926.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)    
Predicted Functional Partners:
OOG23215.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
OOG25620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.729
OOG23208.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
OOG21224.1
Sulfur oxidation c-type cytochrome SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.688
OOG28731.1
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
OOG21225.1
Sulfur oxidation c-type cytochrome SoxA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.670
OOG23156.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.665
OOG21226.1
Sulfur oxidation c-type cytochrome SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.660
OOG27623.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.645
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
    
   0.638
Your Current Organism:
Thioalkalivibrio denitrificans
NCBI taxonomy Id: 108003
Other names: DSM 13742, NCCB 100001, Thialkalivibrio denitrificans, Thioalkalivibrio denitrificans Sorokin et al. 2001, strain ALJD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.