STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB13061.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
SCB13053.1
Hypothetical protein.
 
     0.955
SCB13066.1
Rod binding protein.
 
     0.930
SCB13079.1
Flagellar biosynthetic protein FliR.
 
     0.915
flbT
Flagellar protein FlbT; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation.
 
     0.893
SCB13121.1
Flagellar protein FlaF.
 
     0.893
SCB13128.1
Flagellar hook-associated protein 3 FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
     0.873
SCB13134.1
Flagellar hook-associated protein 1 FlgK.
 
     0.865
SCB13151.1
Transglycosylase SLT domain-containing protein.
 
     0.833
SCB13164.1
Chemotaxis protein MotC.
 
     0.829
SCB13178.1
Hypothetical protein.
 
     0.828
Your Current Organism:
Bradyrhizobium yuanmingense
NCBI taxonomy Id: 108015
Other names: B. yuanmingense, Bradyrhizobium sp. B071, Bradyrhizobium sp. LMTR 28, Bradyrhizobium sp. LMTR 41, Bradyrhizobium sp. mas13, Bradyrhizobium sp. mas28, Bradyrhizobium sp. mas34, Bradyrhizobium sp. mas46, Bradyrhizobium sp. mas47, Bradyrhizobium yuanmingense Yao et al. 2002, CCBAU 10071, CFNEB 101, CIP 108027, NBRC 100594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.