Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB09617.1 | SCB22735.1 | GA0061099_1001411 | GA0061099_1003176 | MFS transporter, NNP family, nitrate/nitrite transporter. | Nitronate monooxygenase. | 0.892 |
SCB09617.1 | SCB22760.1 | GA0061099_1001411 | GA0061099_1003180 | MFS transporter, NNP family, nitrate/nitrite transporter. | Nitronate monooxygenase. | 0.892 |
SCB09617.1 | SCB37477.1 | GA0061099_1001411 | GA0061099_1005654 | MFS transporter, NNP family, nitrate/nitrite transporter. | Nitronate monooxygenase. | 0.892 |
SCB09617.1 | SCB37483.1 | GA0061099_1001411 | GA0061099_1005655 | MFS transporter, NNP family, nitrate/nitrite transporter. | Nitronate monooxygenase. | 0.892 |
SCB22735.1 | SCB09617.1 | GA0061099_1003176 | GA0061099_1001411 | Nitronate monooxygenase. | MFS transporter, NNP family, nitrate/nitrite transporter. | 0.892 |
SCB22735.1 | SCB22742.1 | GA0061099_1003176 | GA0061099_1003177 | Nitronate monooxygenase. | Thioesterase-like superfamily protein. | 0.724 |
SCB22735.1 | SCB22749.1 | GA0061099_1003176 | GA0061099_1003178 | Nitronate monooxygenase. | Hypothetical protein. | 0.696 |
SCB22735.1 | SCB22760.1 | GA0061099_1003176 | GA0061099_1003180 | Nitronate monooxygenase. | Nitronate monooxygenase. | 0.740 |
SCB22735.1 | SCB37477.1 | GA0061099_1003176 | GA0061099_1005654 | Nitronate monooxygenase. | Nitronate monooxygenase. | 0.761 |
SCB22735.1 | SCB37483.1 | GA0061099_1003176 | GA0061099_1005655 | Nitronate monooxygenase. | Nitronate monooxygenase. | 0.769 |
SCB22735.1 | SCB52015.1 | GA0061099_1003176 | GA0061099_10256 | Nitronate monooxygenase. | Acyl transferase domain-containing protein. | 0.910 |
SCB22735.1 | SCB52159.1 | GA0061099_1003176 | GA0061099_10282 | Nitronate monooxygenase. | Acyl-CoA dehydrogenase. | 0.707 |
SCB22735.1 | SCB52985.1 | GA0061099_1003176 | GA0061099_10452 | Nitronate monooxygenase. | Phosphopantetheine attachment site. | 0.767 |
SCB22735.1 | guaA | GA0061099_1003176 | GA0061099_1004366 | Nitronate monooxygenase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.697 |
SCB22742.1 | SCB22735.1 | GA0061099_1003177 | GA0061099_1003176 | Thioesterase-like superfamily protein. | Nitronate monooxygenase. | 0.724 |
SCB22742.1 | SCB22749.1 | GA0061099_1003177 | GA0061099_1003178 | Thioesterase-like superfamily protein. | Hypothetical protein. | 0.768 |
SCB22749.1 | SCB22735.1 | GA0061099_1003178 | GA0061099_1003176 | Hypothetical protein. | Nitronate monooxygenase. | 0.696 |
SCB22749.1 | SCB22742.1 | GA0061099_1003178 | GA0061099_1003177 | Hypothetical protein. | Thioesterase-like superfamily protein. | 0.768 |
SCB22760.1 | SCB09617.1 | GA0061099_1003180 | GA0061099_1001411 | Nitronate monooxygenase. | MFS transporter, NNP family, nitrate/nitrite transporter. | 0.892 |
SCB22760.1 | SCB22735.1 | GA0061099_1003180 | GA0061099_1003176 | Nitronate monooxygenase. | Nitronate monooxygenase. | 0.740 |
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