Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB10464.1 | SCB29157.1 | GA0061099_1001527 | GA0061099_1004275 | EF-hand domain pair. | Cyclohexanone monooxygenase. | 0.764 |
SCB29157.1 | SCB10464.1 | GA0061099_1004275 | GA0061099_1001527 | Cyclohexanone monooxygenase. | EF-hand domain pair. | 0.764 |
SCB29157.1 | SCB29163.1 | GA0061099_1004275 | GA0061099_1004276 | Cyclohexanone monooxygenase. | Membrane-bound lytic murein transglycosylase B. | 0.640 |
SCB29157.1 | SCB37135.1 | GA0061099_1004275 | GA0061099_1005581 | Cyclohexanone monooxygenase. | Acetyl esterase/lipase. | 0.665 |
SCB29157.1 | SCB41611.1 | GA0061099_1004275 | GA0061099_1006582 | Cyclohexanone monooxygenase. | Acetyl esterase/lipase. | 0.650 |
SCB29157.1 | SCB42513.1 | GA0061099_1004275 | GA0061099_100762 | Cyclohexanone monooxygenase. | Carboxymuconolactone decarboxylase family protein. | 0.644 |
SCB29157.1 | SCB49385.1 | GA0061099_1004275 | GA0061099_101150 | Cyclohexanone monooxygenase. | EF hand. | 0.764 |
SCB29157.1 | atpA | GA0061099_1004275 | GA0061099_100251 | Cyclohexanone monooxygenase. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.810 |
SCB29157.1 | atpG | GA0061099_1004275 | GA0061099_100250 | Cyclohexanone monooxygenase. | F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.672 |
SCB29157.1 | rplQ | GA0061099_1004275 | GA0061099_1008220 | Cyclohexanone monooxygenase. | LSU ribosomal protein L17P. | 0.646 |
SCB29157.1 | rpmJ | GA0061099_1004275 | GA0061099_1003147 | Cyclohexanone monooxygenase. | LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family. | 0.637 |
SCB29163.1 | SCB29157.1 | GA0061099_1004276 | GA0061099_1004275 | Membrane-bound lytic murein transglycosylase B. | Cyclohexanone monooxygenase. | 0.640 |
SCB37135.1 | SCB29157.1 | GA0061099_1005581 | GA0061099_1004275 | Acetyl esterase/lipase. | Cyclohexanone monooxygenase. | 0.665 |
SCB41611.1 | SCB29157.1 | GA0061099_1006582 | GA0061099_1004275 | Acetyl esterase/lipase. | Cyclohexanone monooxygenase. | 0.650 |
SCB42513.1 | SCB29157.1 | GA0061099_100762 | GA0061099_1004275 | Carboxymuconolactone decarboxylase family protein. | Cyclohexanone monooxygenase. | 0.644 |
SCB49385.1 | SCB29157.1 | GA0061099_101150 | GA0061099_1004275 | EF hand. | Cyclohexanone monooxygenase. | 0.764 |
atpA | SCB29157.1 | GA0061099_100251 | GA0061099_1004275 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Cyclohexanone monooxygenase. | 0.810 |
atpA | atpG | GA0061099_100251 | GA0061099_100250 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
atpA | rplQ | GA0061099_100251 | GA0061099_1008220 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | LSU ribosomal protein L17P. | 0.890 |
atpA | rpmJ | GA0061099_100251 | GA0061099_1003147 | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family. | 0.762 |
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