Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB20287.1 | SCB23401.1 | GA0061099_1002872 | GA0061099_1003267 | Arginase; Belongs to the arginase family. | N-formylglutamate amidohydrolase. | 0.467 |
SCB20287.1 | SCB42765.1 | GA0061099_1002872 | GA0061099_1007125 | Arginase; Belongs to the arginase family. | Imidazolonepropionase. | 0.782 |
SCB20287.1 | SCB47585.1 | GA0061099_1002872 | GA0061099_1009256 | Arginase; Belongs to the arginase family. | Agmatinase; Belongs to the arginase family. | 0.565 |
SCB20287.1 | SCB48286.1 | GA0061099_1002872 | GA0061099_101088 | Arginase; Belongs to the arginase family. | Arginase; Belongs to the arginase family. | 0.799 |
SCB20287.1 | hutH | GA0061099_1002872 | GA0061099_1010199 | Arginase; Belongs to the arginase family. | Histidine ammonia-lyase. | 0.900 |
SCB20287.1 | hutU | GA0061099_1002872 | GA0061099_1010198 | Arginase; Belongs to the arginase family. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.463 |
SCB23401.1 | SCB20287.1 | GA0061099_1003267 | GA0061099_1002872 | N-formylglutamate amidohydrolase. | Arginase; Belongs to the arginase family. | 0.467 |
SCB23401.1 | SCB29091.1 | GA0061099_1003267 | GA0061099_1004265 | N-formylglutamate amidohydrolase. | Cytosine deaminase. | 0.598 |
SCB23401.1 | SCB42765.1 | GA0061099_1003267 | GA0061099_1007125 | N-formylglutamate amidohydrolase. | Imidazolonepropionase. | 0.941 |
SCB23401.1 | SCB47585.1 | GA0061099_1003267 | GA0061099_1009256 | N-formylglutamate amidohydrolase. | Agmatinase; Belongs to the arginase family. | 0.514 |
SCB23401.1 | SCB48286.1 | GA0061099_1003267 | GA0061099_101088 | N-formylglutamate amidohydrolase. | Arginase; Belongs to the arginase family. | 0.467 |
SCB23401.1 | SCB48769.1 | GA0061099_1003267 | GA0061099_1010202 | N-formylglutamate amidohydrolase. | Transcriptional regulator, GntR family. | 0.651 |
SCB23401.1 | hutH | GA0061099_1003267 | GA0061099_1010199 | N-formylglutamate amidohydrolase. | Histidine ammonia-lyase. | 0.599 |
SCB23401.1 | hutU | GA0061099_1003267 | GA0061099_1010198 | N-formylglutamate amidohydrolase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.658 |
SCB29091.1 | SCB23401.1 | GA0061099_1004265 | GA0061099_1003267 | Cytosine deaminase. | N-formylglutamate amidohydrolase. | 0.598 |
SCB29091.1 | SCB42765.1 | GA0061099_1004265 | GA0061099_1007125 | Cytosine deaminase. | Imidazolonepropionase. | 0.535 |
SCB29091.1 | hutH | GA0061099_1004265 | GA0061099_1010199 | Cytosine deaminase. | Histidine ammonia-lyase. | 0.601 |
SCB29091.1 | mtnP | GA0061099_1004265 | GA0061099_1002598 | Cytosine deaminase. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.592 |
SCB42765.1 | SCB20287.1 | GA0061099_1007125 | GA0061099_1002872 | Imidazolonepropionase. | Arginase; Belongs to the arginase family. | 0.782 |
SCB42765.1 | SCB23401.1 | GA0061099_1007125 | GA0061099_1003267 | Imidazolonepropionase. | N-formylglutamate amidohydrolase. | 0.941 |
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