STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB42395.1Xanthine dehydrogenase YagS FAD-binding subunit. (351 aa)    
Predicted Functional Partners:
SCB42391.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
 0.997
SCB42398.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.993
SCB15747.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.992
SCB06851.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
 0.989
SCB43509.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
 0.987
SCB48434.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.984
SCB06858.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.974
SCB43517.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.964
SCB49322.1
Carbon-monoxide dehydrogenase small subunit.
 
 0.931
SCB41751.1
Carbon-monoxide dehydrogenase small subunit.
 
 0.929
Your Current Organism:
Bradyrhizobium yuanmingense
NCBI taxonomy Id: 108015
Other names: B. yuanmingense, Bradyrhizobium sp. B071, Bradyrhizobium sp. LMTR 28, Bradyrhizobium sp. LMTR 41, Bradyrhizobium sp. mas13, Bradyrhizobium sp. mas28, Bradyrhizobium sp. mas34, Bradyrhizobium sp. mas46, Bradyrhizobium sp. mas47, Bradyrhizobium yuanmingense Yao et al. 2002, CCBAU 10071, CFNEB 101, CIP 108027, NBRC 100594
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