Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB08036.1 | SCB33640.1 | GA0061099_1001195 | GA0061099_100563 | Outer membrane protein. | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | 0.908 |
SCB08036.1 | SCB33959.1 | GA0061099_1001195 | GA0061099_1005112 | Outer membrane protein. | Outer membrane protein. | 0.894 |
SCB08036.1 | SCB36780.1 | GA0061099_1001195 | GA0061099_1005526 | Outer membrane protein. | Outer membrane protein, cobalt-zinc-cadmium efflux system. | 0.515 |
SCB08036.1 | SCB45999.1 | GA0061099_1001195 | GA0061099_1008279 | Outer membrane protein. | Putative ABC transport system permease protein. | 0.890 |
SCB08036.1 | SCB46295.1 | GA0061099_1001195 | GA0061099_1008343 | Outer membrane protein. | ATP-binding cassette, subfamily B. | 0.918 |
SCB08036.1 | SCB46299.1 | GA0061099_1001195 | GA0061099_1008344 | Outer membrane protein. | HlyD family secretion protein. | 0.824 |
SCB12050.1 | SCB45999.1 | GA0061099_1001782 | GA0061099_1008279 | Hypothetical protein. | Putative ABC transport system permease protein. | 0.885 |
SCB12050.1 | SCB46295.1 | GA0061099_1001782 | GA0061099_1008343 | Hypothetical protein. | ATP-binding cassette, subfamily B. | 0.612 |
SCB12050.1 | SCB46299.1 | GA0061099_1001782 | GA0061099_1008344 | Hypothetical protein. | HlyD family secretion protein. | 0.716 |
SCB33640.1 | SCB08036.1 | GA0061099_100563 | GA0061099_1001195 | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | Outer membrane protein. | 0.908 |
SCB33640.1 | SCB33959.1 | GA0061099_100563 | GA0061099_1005112 | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | Outer membrane protein. | 0.923 |
SCB33640.1 | SCB45999.1 | GA0061099_100563 | GA0061099_1008279 | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | Putative ABC transport system permease protein. | 0.890 |
SCB33640.1 | SCB46295.1 | GA0061099_100563 | GA0061099_1008343 | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | ATP-binding cassette, subfamily B. | 0.661 |
SCB33640.1 | SCB46299.1 | GA0061099_100563 | GA0061099_1008344 | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | HlyD family secretion protein. | 0.762 |
SCB33959.1 | SCB08036.1 | GA0061099_1005112 | GA0061099_1001195 | Outer membrane protein. | Outer membrane protein. | 0.894 |
SCB33959.1 | SCB33640.1 | GA0061099_1005112 | GA0061099_100563 | Outer membrane protein. | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | 0.923 |
SCB33959.1 | SCB36780.1 | GA0061099_1005112 | GA0061099_1005526 | Outer membrane protein. | Outer membrane protein, cobalt-zinc-cadmium efflux system. | 0.515 |
SCB33959.1 | SCB45999.1 | GA0061099_1005112 | GA0061099_1008279 | Outer membrane protein. | Putative ABC transport system permease protein. | 0.890 |
SCB33959.1 | SCB46295.1 | GA0061099_1005112 | GA0061099_1008343 | Outer membrane protein. | ATP-binding cassette, subfamily B. | 0.918 |
SCB33959.1 | SCB46299.1 | GA0061099_1005112 | GA0061099_1008344 | Outer membrane protein. | HlyD family secretion protein. | 0.823 |
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