STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB46699.1Iron complex transport system ATP-binding protein. (283 aa)    
Predicted Functional Partners:
SCB46701.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
SCB46703.1
Iron complex transport system substrate-binding protein.
 
 0.999
SCB25284.1
Iron complex transport system permease protein.
 
 0.998
SCB25290.1
Iron complex transport system substrate-binding protein.
 
 0.993
SCB46697.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
 
  
 0.895
SCB19277.1
Iron complex outermembrane recepter protein.
 
  
 0.731
SCB46694.1
Putative ATP-binding cassette transporter.
 
    0.729
SCB36710.1
Iron complex outermembrane recepter protein.
 
  
 0.708
SCB34189.1
Iron complex outermembrane recepter protein.
 
  
 0.701
SCB23105.1
Zinc/manganese transport system permease protein.
    
 0.695
Your Current Organism:
Bradyrhizobium yuanmingense
NCBI taxonomy Id: 108015
Other names: B. yuanmingense, Bradyrhizobium sp. B071, Bradyrhizobium sp. LMTR 28, Bradyrhizobium sp. LMTR 41, Bradyrhizobium sp. mas13, Bradyrhizobium sp. mas28, Bradyrhizobium sp. mas34, Bradyrhizobium sp. mas46, Bradyrhizobium sp. mas47, Bradyrhizobium yuanmingense Yao et al. 2002, CCBAU 10071, CFNEB 101, CIP 108027, NBRC 100594
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