STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISF_01697Negative regulator of differentiation 1. (790 aa)    
Predicted Functional Partners:
ISF_08445
Cap binding protein.
    
 0.665
ISF_08783
Nuclear cap-binding protein subunit 2.
    
 0.664
ISF_06416
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.654
ISF_00031
Eukaryotic translation initiation factor 2 gamma subunit.
   
 0.652
ISF_07928
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.
    
 0.651
ISF_01406
Eukaryotic initiation factor 4A-12; Belongs to the DEAD box helicase family.
   
 0.643
ISF_08675
DNA-directed RNA polymerase, M/15kDa subunit.
   
  0.631
ISF_00585
Nucleotide-binding, alpha-beta plait.
    
 0.629
ISF_01060
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.629
ISF_09400
RNA polymerase, subunit N/RPB10.
    
  0.629
Your Current Organism:
Cordyceps fumosorosea
NCBI taxonomy Id: 1081104
Other names: C. fumosorosea ARSEF 2679, Cordyceps fumosorosea ARSEF 2679, Isaria fumosorosea ARSEF 2679
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.