STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR_07175FAD dependent oxidoreductase. (518 aa)    
Predicted Functional Partners:
NOR_02989
Tryptophan synthase.
     
 0.825
NOR_04092
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.716
NOR_02810
SNF2-related protein.
    
 0.714
NOR_01439
Histone H2B; Belongs to the histone H2B family.
    
 0.713
NOR_04091
Histone H3; Belongs to the histone H3 family.
    
 0.695
NOR_02196
GRF zinc finger domain containing protein.
    
 0.695
NOR_01438
Histone H2A; Belongs to the histone H2A family.
    
 0.691
NOR_05981
Chromatin assembly factor 1 subunit C.
    
 0.681
NOR_05727
Squalene synthase.
   
 
 0.668
NOR_05395
Transcription factor jumonji/aspartyl beta-hydroxylase.
   
 0.667
Your Current Organism:
Metarhizium rileyi
NCBI taxonomy Id: 1081105
Other names: M. rileyi RCEF 4871, Metarhizium rileyi RCEF 4871, Nomuraea rileyi RCEF 4871
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.