STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEL_06859NACHT and WD40 domain protein. (207 aa)    
Predicted Functional Partners:
LEL_10595
Ankyrin repeat-containing domain protein.
    
  0.407
LEL_09966
Ankyrin repeat-containing domain protein.
    
  0.407
LEL_06359
Protein kinase-like domain protein.
    
  0.403
LEL_05128
Leucine-rich repeat protein.
    
  0.403
LEL_02331
Uncharacterized protein.
    
  0.403
LEL_09948
Ankyrin.
    
  0.403
LEL_07010
Protein kinase-like domain protein.
    
  0.403
LEL_02258
Uncharacterized protein.
    
  0.403
LEL_02708
EST1_DNA_bind domain-containing protein.
    
  0.403
LEL_00187
Uncharacterized protein.
    
  0.403
Your Current Organism:
Cordyceps confragosa
NCBI taxonomy Id: 1081108
Other names: C. confragosa RCEF 1005, Cordyceps confragosa RCEF 1005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.