STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEL_00556WD40 repeat-like-containing domain protein. (874 aa)    
Predicted Functional Partners:
LEL_06646
WD40 repeat-like-containing domain protein.
   
 0.999
LEL_04496
Nucleolar complex protein 4.
   
  0.999
LEL_05176
Small nucleolar ribonucleoprotein complex subunit.
   
 0.999
LEL_04561
SSU processome component Utp10.
   
 0.999
LEL_01393
U3 small nucleolar RNA-associated protein 22.
   
 0.999
LEL_10670
Nucleic acid-binding, OB-fold-like protein.
   
 0.999
LEL_07537
WD40/YVTN repeat-like-containing domain protein.
  
 0.999
LEL_08532
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 0.999
LEL_07522
Small nucleolar ribonucleoprotein complex subunit.
   
 0.999
LEL_06607
Elongation factor 3.
   
   0.999
Your Current Organism:
Cordyceps confragosa
NCBI taxonomy Id: 1081108
Other names: C. confragosa RCEF 1005, Cordyceps confragosa RCEF 1005
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