STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAL_02743Transcription factor. (797 aa)    
Predicted Functional Partners:
AAL_06934
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.841
AAL_06750
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.838
AAL_00609
HEAT repeat protein.
   
  0.684
AAL_04138
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.642
AAL_00215
CCAAT-binding factor.
    
  0.642
AAL_07637
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.642
AAL_06724
U3 small nucleolar RNA associated protein.
    
  0.642
AAL_03707
FCF1 small subunit.
    
  0.642
AAL_07529
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.640
AAL_06621
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.640
Your Current Organism:
Moelleriella libera
NCBI taxonomy Id: 1081109
Other names: Aschersonia aleyrodis RCEF 2490, M. libera RCEF 2490, Moelleriella libera RCEF 2490
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.