STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAL_01634Homeodomain-like protein. (589 aa)    
Predicted Functional Partners:
AAL_03724
DNA polymerase alpha/epsilon, subunit B.
    
 0.668
AAL_05065
Uncharacterized protein.
    
 0.653
AAL_04330
DNA repair nuclease, XPF-type/Helicase.
    
 0.648
AAL_03513
DNA polymerase.
   
 0.642
AAL_07038
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.626
AAL_03777
Chromatin assembly factor 1 subunit C.
    
  0.624
AAL_02222
Ankyrin.
    
  0.622
AAL_03822
Small nuclear ribonucleoprotein Sm D2.
    
 0.621
AAL_07177
MUS38-like protein.
    
 0.616
AAL_01793
Small nuclear ribonucleoprotein G.
    
  0.610
Your Current Organism:
Moelleriella libera
NCBI taxonomy Id: 1081109
Other names: Aschersonia aleyrodis RCEF 2490, M. libera RCEF 2490, Moelleriella libera RCEF 2490
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.