STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C8E52_3557Unannotated protein. (517 aa)    
Predicted Functional Partners:
GCA_000226955_00984
Unannotated protein.
 
   
 0.680
proB
Unannotated protein; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.676
C8E52_3558
Unannotated protein.
       0.676
C8E52_3556
Unannotated protein.
     
 0.578
C8E52_3555
Unannotated protein.
       0.574
C8E52_3560
Unannotated protein.
       0.549
C8E52_3554
Unannotated protein.
       0.463
obg
Unannotated protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.445
Your Current Organism:
Sphingomonas elodea
NCBI taxonomy Id: 1081640
Other names: Pseudomonas sp. ATCC 31461, S. elodea ATCC 31461, Sphingomonas elodea ATCC 31461, Sphingomonas elodea str. ATCC 31461, Sphingomonas elodea strain ATCC 31461
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.