STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF76919.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
SDF76947.1
Acetoin utilization protein AcuC.
       0.785
SDF77033.1
Multicomponent Na+:H+ antiporter subunit E.
       0.547
SDF76977.1
Multisubunit sodium/proton antiporter, MrpG subunit.
       0.546
SDF77007.1
Multicomponent Na+:H+ antiporter subunit F.
       0.543
SDF77076.1
Multisubunit sodium/proton antiporter, MrpD subunit.
       0.523
SDF77104.1
Multisubunit sodium/proton antiporter, MrpC subunit.
       0.515
SDF77153.1
Multisubunit sodium/proton antiporter, MrpA subunit.
       0.509
SDF77131.1
Multisubunit sodium/proton antiporter, MrpB subunit.
       0.507
Your Current Organism:
Limimonas halophila
NCBI taxonomy Id: 1082479
Other names: DSM 25584, IBRC-M 10018, L. halophila, Limimonas halophila Amoozegar et al. 2013, Rhodospirillaceae bacterium Ia16, strain IA16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.