STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG25218.1Aldo/keto reductase. (311 aa)    
Predicted Functional Partners:
SDF44362.1
ATP:ADP antiporter, AAA family.
 
     0.790
SDG22842.1
Betaine-homocysteine S-methyltransferase.
   
 0.790
SDF68291.1
Threonine dehydratase.
   
 
 0.787
SDF93371.1
Sulfite reductase (NADPH) alpha subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.
  
  
 0.772
SDG06267.1
Predicted oxidoreductase.
 
 0.760
SDG33968.1
Predicted oxidoreductase.
 
0.754
SDF57705.1
Superoxide dismutase, Cu-Zn family.
  
 
 0.743
SDG25116.1
Putative serine protein kinase, PrkA.
   
    0.731
SDF79114.1
Threonine dehydrogenase.
  
 0.702
SDF75093.1
Glycosyl transferase family 2.
     
 0.661
Your Current Organism:
Limimonas halophila
NCBI taxonomy Id: 1082479
Other names: DSM 25584, IBRC-M 10018, L. halophila, Limimonas halophila Amoozegar et al. 2013, Rhodospirillaceae bacterium Ia16, strain IA16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.