STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_1534Hypothetical protein. (171 aa)    
Predicted Functional Partners:
KKY_1533
Iron-sulfur cluster assembly ATPase protein SufC.
       0.791
KKY_1535
Iron-sulfur cluster assembly protein SufB.
       0.791
KKY_1532
Iron-sulfur cluster assembly protein SufD.
       0.780
KKY_1531
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.766
KKY_1530
FeS assembly SUF system protein.
       0.753
KKY_1536
Cysteine desulfurase.
       0.747
KKY_1529
Iron binding protein SufA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
       0.709
KKY_1230
Metal-dependent hydrolase.
  
    0.591
KKY_1537
Alpha/beta hydrolase.
       0.451
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.