STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_168Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA; 3.A.1.5.1. (511 aa)    
Predicted Functional Partners:
KKY_169
Binding-protein-dependent transport systems inner membrane component.
   0.891
KKY_170
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
   0.882
KKY_3034
Dipeptide transport system permease protein DppB; 3.A.1.5.2.
 
   0.704
KKY_846
Dipeptide transport system permease protein DppB, putative hemin permease; 3.A.1.5.2.
 
   0.690
KKY_845
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
   0.687
KKY_3033
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
   0.661
KKY_3665
Dipeptide transport system permease protein DppB; 3.A.1.5.2.
 
   0.658
KKY_1065
Dipeptide transport system permease protein DppB; 3.A.1.5.2.
 
   0.651
KKY_3827
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
   0.649
KKY_1207
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
   0.643
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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