STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_17154-carboxymuconolactone decarboxylase. (134 aa)    
Predicted Functional Partners:
KKY_1717
Beta-ketoadipate enol-lactone hydrolase.
 
 0.998
KKY_1712
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.996
KKY_606
Beta-ketoadipate enol-lactone hydrolase.
 
 0.995
KKY_1714
Protocatechuate 3,4-dioxygenase beta chain.
 
  
 0.967
KKY_1713
Protocatechuate 3,4-dioxygenase alpha chain.
 
  
 0.964
KKY_3411
4-carboxymuconolactone decarboxylase.
  
  
 
0.921
KKY_2369
Cation/multidrug efflux pump.
    
 0.911
KKY_1716
Beta-ketoadipate enol-lactone hydrolase.
 
  
 0.829
KKY_1720
P-hydroxybenzoate hydroxylase.
 
   
 0.815
KKY_255
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.
 
  
 0.622
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.