STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_1884ATPases of the AAA+ class. (292 aa)    
Predicted Functional Partners:
metAS
Homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.
 
     0.720
KKY_3434
Hypothetical protein.
 
     0.593
KKY_15
Hypothetical protein.
  
 
 0.512
KKY_2425
Thiamin pyrophosphokinase.
  
     0.506
KKY_1883
Hypothetical protein.
       0.458
KKY_294
ABC transporter ATP-binding protein.
  
 0.432
KKY_2291
Multi-sensor hybrid histidine kinase.
  
 
 0.430
KKY_896
ABC transporter HlyB/MsbA family.
    
 0.405
KKY_2272
ABC transporter, permease protein, HisMQ family.
  
     0.403
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.