STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_19Putative nucleoside ABC transporter, substrate-binding component. (335 aa)    
Predicted Functional Partners:
KKY_20
Putative nucleoside ABC transporter, ATP-binding component.
 
 0.991
KKY_21
Putative nucleoside ABC transporter, permease 1 component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.989
KKY_22
Putative nucleoside ABC transporter, permease 2 component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.988
KKY_2226
Sugar ABC transporter, ATP-binding protein.
 
 0.968
KKY_2227
Unspecified monosaccharide ABC transport system, permease component Ia / Unspecified monosaccharide ABC transport system, permease component Ib; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.965
KKY_2228
Putative deoxyribose-specific ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.963
KKY_2378
Basic membrane lipoprotein.
  
  
  0.937
KKY_2229
Bmp family protein.
  
 
 
0.915
KKY_23
Cytidine deaminase.
 
   
 0.809
KKY_25
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
 
  
 0.778
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.