STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_1992Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (344 aa)    
Predicted Functional Partners:
KKY_1991
ABC transporter related protein.
 
 0.974
KKY_225
ABC transporter (iron.B12.siderophore.hemin), ATP-binding component.
 
 0.887
KKY_78
ABC transporter (iron.B12.siderophore.hemin), ATP-binding component.
 
 0.885
KKY_2354
Iron3+ dicitrate transport ATP-binding protein FecE; 3.A.1.14.1.
 
 0.872
KKY_1168
Ferric enterobactin transport ATP-binding protein.
 
 0.861
KKY_3640
ABC transporter related protein.
 
 0.852
KKY_1993
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    
0.827
KKY_1994
ABC-type Fe3+-siderophore transport system, periplasmic iron-binding component.
 
   0.773
KKY_80
ABC transporter (iron.B12.siderophore.hemin), periplasmic substrate-binding component.
 
 
 0.596
KKY_223
ABC transporter (iron.B12.siderophore.hemin), periplasmic substrate-binding component.
 
 0.520
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.