STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_2244Conserved hypothetical protein; Putative RmlC-like cupin domains. (275 aa)    
Predicted Functional Partners:
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
  
  0.993
KKY_3720
Hypothetical protein.
    
  0.906
KKY_2567
2,4-diketo-3-deoxy-L-fuconate hydrolase.
     
  0.900
KKY_2238
Transthyretin family protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.533
KKY_2246
Intradiol ring-cleavage dioxygenase.
       0.487
KKY_2234
Conserved hypothetical membrane protein; Similar to Y20848.
 
     0.480
KKY_2237
Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
 
     0.449
KKY_2236
Xanthine dehydrogenase, molybdenum binding subunit.
 
     0.447
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.