STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_2555Two-component nitrogen fixation transcriptional regulator FixJ. (216 aa)    
Predicted Functional Partners:
KKY_2554
Two-component oxygen-sensor histidine kinase FixL.
 0.997
KKY_385
Sensor histidine kinase.
  
 
 0.930
KKY_387
Two component transcriptional regulator, LuxR family protein.
  
  
 
0.919
KKY_3678
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
      0.753
KKY_1546
PAS/PAC domain protein.
 
 
 
 0.750
KKY_1846
Sensory box histidine kinase/response regulator.
 
 
 
 0.709
KKY_3075
Two-component response regulator.
  
   
 0.624
KKY_308
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
  
   
 0.619
KKY_2386
Formate hydrogenlyase transcriptional activator.
  
 
 0.600
KKY_2529
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
   
 
 0.589
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.