STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_2623S-adenosylhomocysteine deaminase, methylthioadenosine deaminase. (467 aa)    
Predicted Functional Partners:
KKY_2063
5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase.
    
 0.902
KKY_2625
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit.
  
    0.782
KKY_2626
ABC transporter related protein.
  
    0.782
KKY_2624
ABC transporter related protein.
       0.774
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
       0.723
KKY_2622
Twin-arginine translocation pathway signal.
       0.576
KKY_2720
Putative stomatin/prohibitin-family membrane protease subunit YbbK.
      0.467
KKY_2620
Inosine-uridine preferring nucleoside hydrolase.
  
  
 0.423
KKY_2621
Transcriptional regulator, RpiR family.
       0.415
KKY_2239
Chitooligosaccharide deacetylase, putative uricase.
 
   
 0.401
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.