STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_3093Hypothetical protein; Belongs to the DapA family. (308 aa)    
Predicted Functional Partners:
KKY_3097
Dihydrodipicolinate synthase; Belongs to the DapA family.
 
     0.892
KKY_3095
Oligopeptide transport ATP-binding protein OppF; 3.A.1.5.1; Belongs to the ABC transporter superfamily.
  
    0.775
KKY_3096
Oligopeptide transport ATP-binding protein OppD; 3.A.1.5.1; Belongs to the ABC transporter superfamily.
       0.774
KKY_3094
Sulfatase.
       0.773
KKY_3092
Arylsulfatase.
       0.762
KKY_3098
Peptide ABC transporter, permease protein.
 
     0.753
KKY_3100
Peptide ABC transporter, periplasmic peptide-binding protein.
 
     0.744
KKY_3099
Oligopeptide teansport system permease protein AppB.
       0.714
KKY_3091
Choline-sulfatase.
       0.695
nanE
N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
  
 0.672
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.