STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_3664Dipeptide transport system permease protein DppC; 3.A.1.5.2. (281 aa)    
Predicted Functional Partners:
KKY_3662
Oligopeptide transport ATP-binding protein OppD; 3.A.1.5.1; Belongs to the ABC transporter superfamily.
    0.975
KKY_3665
Dipeptide transport system permease protein DppB; 3.A.1.5.2.
    0.961
KKY_2520
Oligopeptide transport ATP-binding protein OppD; 3.A.1.5.1; Belongs to the ABC transporter superfamily.
    0.958
KKY_171
Dipeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
    0.945
KKY_2287
(GlcNAc)2 ABC transporter, ATP-binding component 1.
    0.931
KKY_3661
Oligopeptide transport ATP-binding protein OppF; 3.A.1.5.1; Belongs to the ABC transporter superfamily.
    0.914
KKY_3667
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA; 3.A.1.5.1.
   0.896
KKY_3032
Oligopeptide transport ATP-binding protein OppD; 3.A.1.5.1.
    0.892
KKY_172
Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; Belongs to the ABC transporter superfamily.
    0.889
KKY_3095
Oligopeptide transport ATP-binding protein OppF; 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 0.880
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.