STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_3686SN-glycerol-3-phosphate transport ATP-binding protein UgpC; 3.A.1.1.3; Belongs to the ABC transporter superfamily. (348 aa)    
Predicted Functional Partners:
KKY_3684
Sugar ABC transporter, permease protein.
 
   0.964
KKY_3685
Maltose/maltodextrin ABC transporter, permease protein MalG.
   0.963
KKY_424
Maltose/maltodextrin ABC transporter, permease protein MalG.
 
 0.924
KKY_422
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
  
 0.915
KKY_830
Sugar ABC transporter, permease protein, ThuG.
  
  0.898
KKY_1262
sugar-ABC transporter.
  
  0.895
KKY_3683
Sugar-binding protein.
 
   0.891
KKY_1263
Maltose transport protein AmyC.
  
  0.887
KKY_3900
Various polyols ABC transporter, permease component 2.
  
 0.873
KKY_1271
ABC transporter, permease protein.
   
  0.872
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.