STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_3722TRAP transporter solute receptor, unknown substrate 7. (349 aa)    
Predicted Functional Partners:
KKY_3723
TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 7.
 
     0.932
KKY_3724
TRAP dicarboxylate transporter, DctM subunit.
 
    0.931
KKY_3725
Hypothetical protein.
 
     0.904
KKY_3721
Hypothetical protein possibly connected to lactam utilization and allophanate hydrolase; Belongs to the D-glutamate cyclase family.
 
    0.878
KKY_2383
TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 7.
 
    0.806
KKY_3728
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
 
     0.778
KKY_3726
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase.
       0.605
KKY_3727
Hypothetical protein.
       0.605
KKY_3720
Hypothetical protein.
 
     0.480
KKY_2673
TRAP-type C4-dicarboxylate transport system, small permease component.
 
    0.466
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.