STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_3775ABC-type transporter, permease component: POPT family. (283 aa)    
Predicted Functional Partners:
KKY_3774
ABC-type transporter, permease component: POPT family.
 
 0.999
potA-2
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 0.997
KKY_3776
ABC transporter, periplasmic spermidine putrescine-binding protein PotD; 3.A.1.11.1.
 
 
 0.996
KKY_2867
Putrescine transport system permease protein PotI; 3.A.1.11.2.
  
 0.993
KKY_2864
Putrescine ABC transporter putrescine-binding protein PotF; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
 0.940
potA
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.926
KKY_443
Ferric iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.800
KKY_3771
Glutathione S-transferase family protein.
       0.636
KKY_3772
Quinone oxidoreductase.
       0.636
KKY_3770
Endoribonuclease L-PSP family protein.
 
     0.577
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.