STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKY_3826Dipeptide transport system permease protein DppB; 3.A.1.5.2. (314 aa)    
Predicted Functional Partners:
KKY_3827
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
    0.959
KKY_3825
Extracellular solute-binding protein, family 5.
   0.899
KKY_3749
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
    0.827
KKY_3664
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
    0.825
KKY_1207
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
    0.823
KKY_1251
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
    0.823
KKY_3855
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
    0.822
KKY_3098
Peptide ABC transporter, permease protein.
 
    0.821
KKY_170
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
    0.820
KKY_3033
Dipeptide transport system permease protein DppC; 3.A.1.5.2.
 
    0.816
Your Current Organism:
Pelagibacterium halotolerans
NCBI taxonomy Id: 1082931
Other names: Devosia sp. B2, Hyphomicrobiaceae bacterium B2, P. halotolerans B2, Pelagibacterium halotolerans B2, Pelagibacterium halotolerans CGMCC 1.7692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.